NanoDiP is a tool to obtain and analyze low-coverage whole genome
nanopore sequencing information through bascalling, genomic alignment,
copy number extrapolation, and unsupervised machine learning by UMAP-based
dimensions reduction. It is the nanopore-centered implementation of
EpiDiP which stands for Epigenomic
Digital Pathology. NanoDiP hence abbreviates Nanopore
Digital Pathology.
Nanopore sequencing is developed and sold by ONT.
Then authors of this software are not affiliated with ONT.
This software is licensed under the
GPLv3. By using this
program, you agree to the terms specified herein.
This software is not a medical device. Its use occurs in the sole responsibility
of the treating physician. The authors shall not be held liable for any
damage caused by this software.
Basic understanding of how this system works and internal validation are
strongly advised before implementation in a diagnostic setting.
